the farm is on foundations, when the server reboots each night i notice that some animals are missing. it doesn't matter which animal it is, they all have done it. I will then notice it above the roof. normally i would just remove the room and then all is good but, in a basement, that is not doable.
i have had this happen since i got the plugin and it has done it on pterodactyl and other hosts. if it is a plugin conflict, i have no idea what would do that. lol
one thing i will say is that if you do the roof 2 squares high, then it does not do it. so that is odd. idk